modify coverage analysis output and add samtools environment for coverage analysis (b28f0ec7) · Commits · FONDA_A6 / popinSnake · GitLab

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b28f0ec7

Commit b28f0ec7 authored 6 months ago by

kdc715

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modify coverage analysis output and add samtools environment for coverage analysis

parent b0bf1af4

Changes 5

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modules/analysis.smk 1 addition, 1 deletion

modules/analysis.smk
modules/envs/kraken2.yaml 0 additions, 5 deletions

modules/envs/kraken2.yaml
modules/envs/samtools21.yml 31 additions, 0 deletions

modules/envs/samtools21.yml
modules/kraken.smk 1 addition, 1 deletion

modules/kraken.smk
modules/notebooks/contig_coverage_heatmap.py.ipynb 3 additions, 3 deletions

modules/notebooks/contig_coverage_heatmap.py.ipynb

with 36 additions and 10 deletions

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