save notebook analysis in .txt and .pdf format (0edb88a1) · Commits · FONDA_A6 / popinSnake · GitLab

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0edb88a1

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Commit 0edb88a1 authored 1 month ago by

Kedi Cao

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save notebook analysis in .txt and .pdf format

parent e03b0e22

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Changes 10

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Snakefile 5 additions, 5 deletions

Snakefile
snakemodules/analysis.smk 22 additions, 11 deletions

snakemodules/analysis.smk
snakemodules/contigmap.smk 2 additions, 2 deletions

snakemodules/contigmap.smk
snakemodules/envs/notebooks.yml 2 additions, 0 deletions

snakemodules/envs/notebooks.yml
snakemodules/merge.smk 3 additions, 3 deletions

snakemodules/merge.smk
snakemodules/notebooks/content_distribution.py.ipynb 25 additions, 5 deletions

snakemodules/notebooks/content_distribution.py.ipynb
snakemodules/notebooks/contig_coverage_heatmap.py.ipynb 5 additions, 3 deletions

snakemodules/notebooks/contig_coverage_heatmap.py.ipynb
snakemodules/notebooks/read_numbers_in_bar_graph.py.ipynb 79 additions, 9 deletions

snakemodules/notebooks/read_numbers_in_bar_graph.py.ipynb
snakemodules/notebooks/sample_analysis_table.py.ipynb 4 additions, 3 deletions

snakemodules/notebooks/sample_analysis_table.py.ipynb
snakemodules/position.smk 3 additions, 3 deletions

snakemodules/position.smk

with 150 additions and 44 deletions

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